Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter cora family protein | AFIC_002310 | Q57HQ5 | Negative | 2395244 - 2396221 | 36077.1 |
| l,d-transpeptidase | AFIC_002311 | P39176 | Positive | 2396525 - 2397199 | 24530.6 |
| extensin family protein | AFIC_002312 | Not Available | Negative | 2397263 - 2398117 | 30137.4 |
| sulfite exporter taue/safe family protein | AFIC_002313 | Not Available | Positive | 2398319 - 2399047 | 25675.7 |
| duf1499 domain-containing protein | AFIC_002314 | Not Available | Positive | 2399134 - 2399985 | 31449.3 |
| mbl fold metallo-hydrolase | AFIC_002315 | Q6NYF0 | Negative | 2399958 - 2400884 | 33628.1 |
| acyl-coa dehydrogenase | AFIC_002316 | Q92947 | Negative | 2400906 - 2402111 | 44321.3 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | AFIC_002317 | Q0E079 | Negative | 2402198 - 2403274 | 38930.6 |
| hypothetical protein | AFIC_002318 | Not Available | Negative | 2403414 - 2403536 | 4432.29 |
| duf2147 domain-containing protein | AFIC_002319 | Not Available | Positive | 2403535 - 2403993 | 15894.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
