Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase family protein | AFIC_002290 | P72702 | Positive | 2375572 - 2376504 | 33842.2 |
| exodeoxyribonuclease vii small subunit | AFIC_002291 | B6JFI3 | Positive | 2376593 - 2376844 | 9245.98 |
| 1-deoxy-d-xylulose-5-phosphate synthase | AFIC_002292 | Q2IRL7 | Positive | 2377064 - 2378980 | 68065.6 |
| tlya family rna methyltransferase | AFIC_002293 | P19672 | Positive | 2379102 - 2379833 | 25900.1 |
| hypothetical protein | AFIC_002294 | Q89RW4 | Positive | 2379833 - 2381086 | 44653.7 |
| mcp four helix bundle domain-containing protein | AFIC_002295 | O32239 | Positive | 2381313 - 2382995 | 58718.9 |
| hypothetical protein | AFIC_002296 | Not Available | Negative | 2383067 - 2383681 | 22111.3 |
| chorismate synthase | AFIC_002297 | B6JFJ0 | Negative | 2383773 - 2384855 | 38885.3 |
| histidine phosphatase family protein | AFIC_002298 | Q7NJF7 | Negative | 2385095 - 2385694 | 22223.4 |
| enoyl-acp reductase fabi | AFIC_002299 | P58380 | Negative | 2385843 - 2386664 | 29563.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
