Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | AFIC_000198 | P52156 | Positive | 211292 - 212548 | 46676.3 |
| thioredoxin domain-containing protein | AFIC_000199 | P37512 | Negative | 212605 - 214656 | 74477.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | AFIC_000200 | Q1QRZ0 | Positive | 214759 - 216078 | 46836.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | AFIC_000201 | B6JAJ1 | Positive | 216252 - 218126 | 66950.0 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | AFIC_000202 | Q1QRZ2 | Positive | 218157 - 218819 | 23386.2 |
| para family protein | AFIC_000203 | P0CAV7 | Positive | 218816 - 219664 | 30559.8 |
| parb/repb/spo0j family partition protein | AFIC_000204 | P0CAV8 | Positive | 219792 - 220703 | 32626.7 |
| glycosyltransferase family 39 protein | AFIC_000205 | Not Available | Negative | 220758 - 222470 | 63432.2 |
| dna polymerase iii subunit delta | AFIC_000206 | Q9ZDX5 | Negative | 222594 - 223622 | 36532.0 |
| lps assembly lipoprotein lpte | AFIC_000207 | Not Available | Negative | 223632 - 224186 | 20312.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
