Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002280 | Not Available | Negative | 2365588 - 2365935 | 12110.3 |
| hypothetical protein | AFIC_002281 | Not Available | Negative | 2365932 - 2366261 | 11845.9 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | AFIC_002282 | P21801 | Negative | 2366258 - 2367004 | 27773.7 |
| abc transporter substrate-binding protein | AFIC_002283 | Not Available | Negative | 2367042 - 2368046 | 36082.7 |
| abc transporter permease | AFIC_002284 | Q57856 | Negative | 2368108 - 2369004 | 32497.3 |
| abc transporter atp-binding protein | AFIC_002285 | Q57855 | Negative | 2368997 - 2369794 | 29919.7 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | AFIC_002286 | Q9I702 | Negative | 2370242 - 2371738 | 53640.4 |
| lysr family transcriptional regulator | AFIC_002287 | P72131 | Positive | 2371892 - 2372779 | 33374.3 |
| acyl-coa dehydrogenase | AFIC_002288 | Q5LLW7 | Positive | 2372835 - 2374619 | 62644.5 |
| enoyl-coa hydratase-related protein | AFIC_002289 | Q5XIC0 | Positive | 2374771 - 2375517 | 26736.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
