Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 glutamine amidotransferase | AFIC_002270 | Q97VZ9 | Positive | 2354207 - 2354932 | 26585.9 |
| eal domain-containing protein | AFIC_002271 | P55552 | Negative | 2354946 - 2357663 | 100446.0 |
| gntr family transcriptional regulator | AFIC_002272 | O34817 | Negative | 2357824 - 2358570 | 27587.4 |
| ldh family oxidoreductase | AFIC_002273 | Q1QWN5 | Negative | 2358679 - 2359686 | 33920.0 |
| hydroxyacid dehydrogenase | AFIC_002274 | Q1QWN6 | Negative | 2359683 - 2360603 | 32441.5 |
| uxaa family hydrolase | AFIC_002275 | Q58Y43 | Negative | 2360664 - 2361935 | 45739.5 |
| uxaa family hydrolase | AFIC_002276 | Q1QWP1 | Negative | 2361946 - 2362272 | 11611.9 |
| fad-binding protein | AFIC_002277 | D9PU00 | Negative | 2362358 - 2364085 | 61663.9 |
| fumarate hydratase c-terminal domain-containing protein | AFIC_002278 | Q0TD44 | Negative | 2364089 - 2364697 | 22173.8 |
| fumarate hydratase | AFIC_002279 | Q58690 | Negative | 2364708 - 2365583 | 31053.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
