Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite dehydrogenase | AFIC_002260 | A0A286R227 | Negative | 2344687 - 2346033 | 49413.1 |
| metalloregulator arsr/smtb family transcription factor | AFIC_002261 | P52695 | Positive | 2346164 - 2346511 | 13294.4 |
| mbl fold metallo-hydrolase | AFIC_002262 | Q52556 | Positive | 2346508 - 2347515 | 37342.1 |
| thiosulfate oxidation carrier complex protein soxz | AFIC_002263 | Not Available | Positive | 2347554 - 2347871 | 11589.8 |
| cytochrome c family protein | AFIC_002264 | P23021 | Negative | 2348086 - 2348481 | 13770.4 |
| gamma-glutamyltransferase family protein | AFIC_002265 | O05218 | Negative | 2348610 - 2350220 | 56775.3 |
| duf1097 domain-containing protein | AFIC_002266 | Not Available | Negative | 2350315 - 2350857 | 19371.7 |
| amidohydrolase family protein | AFIC_002267 | O52063 | Negative | 2350874 - 2352187 | 47935.9 |
| response regulator transcription factor | AFIC_002268 | P66798 | Negative | 2352340 - 2352972 | 22873.8 |
| pas domain-containing protein | AFIC_002269 | A7X624 | Negative | 2352969 - 2354036 | 39700.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
