Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme-binding protein | AFIC_002250 | P45517 | Negative | 2338369 - 2338791 | 14624.5 |
| dsre family protein | AFIC_002251 | Not Available | Negative | 2338897 - 2339349 | 16597.0 |
| hypothetical protein | AFIC_002252 | Not Available | Negative | 2339363 - 2339857 | 17653.6 |
| thiosulfohydrolase soxb | AFIC_002253 | A9BJC1 | Negative | 2339854 - 2341596 | 63178.9 |
| hypothetical protein | AFIC_002254 | Not Available | Negative | 2341612 - 2341923 | 10849.8 |
| sulfur oxidation c-type cytochrome soxa | AFIC_002255 | Q8KDM7 | Negative | 2341933 - 2342781 | 32070.3 |
| thiosulfate oxidation carrier complex protein soxz | AFIC_002256 | Not Available | Negative | 2342806 - 2343114 | 11013.2 |
| thiosulfate oxidation carrier protein soxy | AFIC_002257 | Not Available | Negative | 2343129 - 2343626 | 17003.7 |
| sulfur oxidation c-type cytochrome soxx | AFIC_002258 | Not Available | Negative | 2343648 - 2344001 | 12895.7 |
| cytochrome c | AFIC_002259 | P25938 | Negative | 2344017 - 2344676 | 23432.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
