Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | AFIC_002240 | P37676 | Negative | 2328427 - 2329509 | 38421.4 |
| gntr family transcriptional regulator | AFIC_002241 | Q82IW0 | Positive | 2329604 - 2330410 | 29818.8 |
| Trna-gln | Not Available | Not Available | Positive | 2330586 - 2330660 | Not Available |
| sulfite exporter taue/safe family protein | AFIC_002243 | P44070 | Positive | 2330999 - 2331853 | 30300.3 |
| molybdopterin-dependent oxidoreductase | AFIC_002244 | Q88FX8 | Negative | 2331887 - 2334109 | 79725.6 |
| (2fe-2s)-binding protein | AFIC_002245 | Q88FX9 | Negative | 2334120 - 2334578 | 16288.9 |
| cytochrome c | AFIC_002246 | Q88FX8 | Negative | 2334575 - 2335852 | 45077.4 |
| duf1236 domain-containing protein | AFIC_002247 | Not Available | Negative | 2336112 - 2336588 | 16833.7 |
| hypothetical protein | AFIC_002248 | Not Available | Negative | 2336585 - 2336758 | 6152.74 |
| yeee/yede family protein | AFIC_002249 | P33015 | Positive | 2337282 - 2338331 | 35841.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
