Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | AFIC_002230 | P55684 | Positive | 2316596 - 2317678 | 39524.5 |
| tonb-dependent receptor | AFIC_002231 | A0A0H2ZI93 | Negative | 2317728 - 2320094 | 85702.0 |
| abc transporter substrate-binding protein | AFIC_002232 | P44206 | Positive | 2320363 - 2321475 | 41339.9 |
| abc transporter atp-binding protein | AFIC_002233 | Q57243 | Negative | 2321528 - 2322343 | 29545.2 |
| iron abc transporter permease | AFIC_002234 | Q57130 | Negative | 2322340 - 2323341 | 34664.0 |
| radical sam protein | AFIC_002235 | Q58195 | Negative | 2323514 - 2324545 | 37971.7 |
| duf126 domain-containing protein | AFIC_002236 | Q8TVA6 | Negative | 2324935 - 2325348 | 14630.9 |
| aconitase x catalytic domain-containing protein | AFIC_002237 | O27472 | Negative | 2325345 - 2326592 | 44974.9 |
| trap transporter large permease | AFIC_002238 | Q9HU16 | Negative | 2326630 - 2327928 | 45808.2 |
| trap transporter small permease | AFIC_002239 | Not Available | Negative | 2327925 - 2328440 | 18509.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
