Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mhs family mfs transporter | AFIC_002220 | P37643 | Negative | 2302819 - 2304141 | 48024.7 |
| choline dehydrogenase | AFIC_002221 | Q6UPE0 | Negative | 2304174 - 2305799 | 59002.4 |
| iclr family transcriptional regulator | AFIC_002222 | Q0K846 | Positive | 2305913 - 2306764 | 30809.5 |
| hypothetical protein | AFIC_002223 | Not Available | Positive | 2306938 - 2307159 | 7802.27 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | AFIC_002224 | Q3SNK1 | Negative | 2307225 - 2309573 | 85985.1 |
| cbs domain-containing protein | AFIC_002225 | O23193 | Negative | 2310120 - 2310851 | 26308.8 |
| epoxyqueuosine reductase queh | AFIC_002226 | Q7VYQ1 | Negative | 2310981 - 2311646 | 25545.2 |
| ribonucleoside-diphosphate reductase subunit alpha | AFIC_002227 | Q9PL93 | Positive | 2312216 - 2315116 | 107318.0 |
| cytochrome ubiquinol oxidase subunit i | AFIC_002228 | Q9PL92 | Positive | 2315218 - 2316261 | 40120.8 |
| hypothetical protein | AFIC_002229 | Not Available | Positive | 2316258 - 2316500 | 8672.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
