Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase family protein | AFIC_002210 | P25126 | Negative | 2290839 - 2291966 | 39541.8 |
| aldehyde dehydrogenase family protein | AFIC_002211 | Q0K845 | Negative | 2291977 - 2293404 | 51571.2 |
| mfs transporter | AFIC_002212 | Q0K843 | Negative | 2293475 - 2294758 | 46522.5 |
| tripartite tricarboxylate transporter permease | AFIC_002213 | P70795 | Negative | 2294967 - 2296478 | 52901.3 |
| tripartite tricarboxylate transporter tctb family protein | AFIC_002214 | Not Available | Negative | 2296483 - 2297013 | 19745.7 |
| tripartite tricarboxylate transporter substrate binding protein | AFIC_002215 | P0A177 | Negative | 2297038 - 2297937 | 32228.8 |
| lysr substrate-binding domain-containing protein | AFIC_002216 | Q8VWE6 | Positive | 2298158 - 2299033 | 31846.6 |
| sulfoacetaldehyde acetyltransferase | AFIC_002217 | Q92UW6 | Negative | 2299107 - 2300882 | 64169.2 |
| iclr family transcriptional regulator | AFIC_002218 | Q0K846 | Positive | 2301045 - 2301821 | 28242.7 |
| bifunctional enoyl-coa hydratase/phosphate acetyltransferase | AFIC_002219 | Q9X448 | Positive | 2301821 - 2302738 | 31983.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
