Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine--8-amino-7-oxononanoate transaminase | AFIC_002200 | Q31SA6 | Positive | 2277830 - 2279092 | 46157.4 |
| methyl-accepting chemotaxis protein | AFIC_002201 | Q2W4T8 | Negative | 2279113 - 2280795 | 59146.0 |
| oxidoreductase | AFIC_002202 | A6SSW9 | Negative | 2281232 - 2282062 | 29383.2 |
| aldo/keto reductase | AFIC_002203 | P77735 | Positive | 2282328 - 2283308 | 36708.9 |
| lysr substrate-binding domain-containing protein | AFIC_002204 | O32255 | Negative | 2283385 - 2284299 | 33066.5 |
| fad/nad(p)-binding protein | AFIC_002205 | Not Available | Positive | 2284380 - 2285846 | 52826.3 |
| eal domain-containing protein | AFIC_002206 | Q9ABX9 | Negative | 2285858 - 2288275 | 88015.3 |
| crp/fnr family transcriptional regulator | AFIC_002207 | P47200 | Negative | 2288517 - 2289266 | 27726.6 |
| hypothetical protein | AFIC_002208 | Not Available | Positive | 2289707 - 2289922 | 7824.22 |
| succinate--coa ligase subunit alpha | AFIC_002209 | O28098 | Negative | 2289952 - 2290842 | 31055.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
