Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | AFIC_002190 | P0A3U4 | Negative | 2268110 - 2268811 | 24868.0 |
| ku protein | AFIC_002191 | A4Z012 | Positive | 2269105 - 2269971 | 32580.8 |
| energy transducer tonb | AFIC_002192 | Q05613 | Negative | 2269995 - 2270792 | 28539.5 |
| tonb system transport protein exbd | AFIC_002193 | Q05606 | Negative | 2270804 - 2271271 | 16462.9 |
| tonb-system energizer exbb | AFIC_002194 | Q05605 | Negative | 2271284 - 2272180 | 30780.0 |
| fe2+-dependent dioxygenase | AFIC_002195 | B6JGF2 | Negative | 2272195 - 2272884 | 25524.5 |
| tonb-dependent siderophore receptor | AFIC_002196 | P81549 | Negative | 2272980 - 2275460 | 89014.5 |
| hypothetical protein | AFIC_002197 | Not Available | Negative | 2275650 - 2275904 | 9414.4 |
| 8-amino-7-oxononanoate synthase | AFIC_002198 | B8J637 | Positive | 2276041 - 2277204 | 41346.3 |
| dethiobiotin synthase | AFIC_002199 | B6JGN8 | Positive | 2277201 - 2277833 | 22696.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
