Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | AFIC_002170 | Not Available | Negative | 2247417 - 2247968 | 20212.8 |
| tripartite tricarboxylate transporter substrate binding protein | AFIC_002171 | Q44018 | Negative | 2248073 - 2249065 | 36545.2 |
| aminotransferase class v-fold plp-dependent enzyme | AFIC_002172 | P55819 | Negative | 2249138 - 2250343 | 43791.6 |
| hypothetical protein | AFIC_002173 | Not Available | Negative | 2250512 - 2250811 | 10862.2 |
| gntr family transcriptional regulator | AFIC_002174 | Q8GAL4 | Positive | 2251016 - 2251741 | 27513.8 |
| fad-binding protein | AFIC_002175 | P77748 | Positive | 2252014 - 2254977 | 107655.0 |
| heme-binding protein | AFIC_002176 | Not Available | Positive | 2255036 - 2255464 | 14337.5 |
| coa transferase | AFIC_002177 | Q7CXU0 | Positive | 2255543 - 2256736 | 43544.1 |
| enoyl-coa hydratase | AFIC_002178 | A4YI89 | Positive | 2256751 - 2257542 | 28420.0 |
| dsd1 family plp-dependent enzyme | AFIC_002179 | O82872 | Positive | 2257553 - 2258653 | 38686.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
