Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slyx family protein | AFIC_002160 | Q2IS91 | Positive | 2233682 - 2233897 | 7958.32 |
| aldo/keto reductase | AFIC_002161 | P76234 | Negative | 2233910 - 2234764 | 30487.2 |
| glycerol-3-phosphate dehydrogenase | AFIC_002162 | P52111 | Negative | 2234835 - 2236412 | 58406.8 |
| fecr family protein | AFIC_002163 | Not Available | Negative | 2236460 - 2237380 | 31285.1 |
| hypothetical protein | AFIC_002164 | Not Available | Negative | 2237392 - 2238756 | 49818.4 |
| glycosyltransferase | AFIC_002165 | Not Available | Negative | 2238895 - 2240670 | 66308.2 |
| mexw/mexi family multidrug efflux rnd transporter permease subunit | AFIC_002166 | Q57124 | Negative | 2240732 - 2243815 | 110091.0 |
| efflux rnd transporter periplasmic adaptor subunit | AFIC_002167 | Q57500 | Negative | 2243835 - 2245043 | 42981.7 |
| tetr/acrr family transcriptional regulator | AFIC_002168 | O53165 | Negative | 2245045 - 2245731 | 25239.3 |
| tripartite tricarboxylate transporter permease | AFIC_002169 | P70795 | Negative | 2245893 - 2247404 | 53130.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
