Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cusa/czca family heavy metal efflux rnd transporter | AFIC_002140 | P94177 | Negative | 2206204 - 2209335 | 112831.0 |
| efflux rnd transporter periplasmic adaptor subunit | AFIC_002141 | P94176 | Negative | 2209454 - 2210707 | 44974.6 |
| m20 family metallopeptidase | AFIC_002142 | P45493 | Negative | 2210938 - 2212113 | 41654.8 |
| gmc family oxidoreductase n-terminal domain-containing protein | AFIC_002143 | Q6UPE0 | Positive | 2212242 - 2213861 | 59325.9 |
| hypothetical protein | AFIC_002144 | Not Available | Positive | 2214019 - 2214255 | 8316.13 |
| aspartate aminotransferase family protein | AFIC_002145 | A0A0J9X1Q5 | Negative | 2214383 - 2215774 | 50439.2 |
| duf2147 domain-containing protein | AFIC_002146 | Not Available | Positive | 2215899 - 2216513 | 20983.3 |
| mmpl family transporter | AFIC_002147 | B3QHB6 | Negative | 2216463 - 2219069 | 93058.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | AFIC_002148 | Q2IRL7 | Positive | 2219282 - 2221198 | 68098.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | AFIC_002149 | Q89QW7 | Positive | 2221224 - 2222168 | 33795.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
