Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s8 family serine peptidase | AFIC_002130 | P00782 | Negative | 2195330 - 2196745 | 48979.6 |
| hypothetical protein | AFIC_002131 | Not Available | Negative | 2196783 - 2197445 | 22551.0 |
| sigma-70 family rna polymerase sigma factor | AFIC_002132 | O53590 | Negative | 2197442 - 2198011 | 21355.6 |
| ggdef domain-containing protein | AFIC_002133 | Q9A5I5 | Positive | 2198357 - 2199466 | 40901.0 |
| duf2336 domain-containing protein | AFIC_002134 | Not Available | Positive | 2199516 - 2200622 | 40022.2 |
| duf1109 domain-containing protein | AFIC_002135 | A0A0H3CC47 | Negative | 2200619 - 2201257 | 22607.4 |
| sigma-70 family rna polymerase sigma factor | AFIC_002136 | A0A0H3CCX2 | Negative | 2201254 - 2201805 | 20337.3 |
| hypothetical protein | AFIC_002137 | Not Available | Positive | 2202016 - 2202693 | 23820.1 |
| acetyl-coa hydrolase | AFIC_002138 | P38942 | Negative | 2202670 - 2204508 | 67035.9 |
| tolc family outer membrane protein | AFIC_002139 | Q8G0Y6 | Positive | 2204732 - 2206129 | 49822.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
