Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf853 domain-containing protein | AFIC_002120 | P39342 | Negative | 2187465 - 2189117 | 58335.5 |
| hypothetical protein | AFIC_002121 | Not Available | Positive | 2189312 - 2189665 | 13165.7 |
| duf4332 domain-containing protein | AFIC_002122 | Not Available | Positive | 2189681 - 2190088 | 14619.2 |
| dihydropteroate synthase | AFIC_002123 | P28822 | Positive | 2190162 - 2191016 | 30003.2 |
| dihydroneopterin aldolase | AFIC_002124 | P0A581 | Positive | 2191013 - 2191378 | 13267.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | AFIC_002125 | P71512 | Positive | 2191382 - 2191873 | 17958.5 |
| rsiv family protein | AFIC_002126 | Not Available | Positive | 2191919 - 2192707 | 28426.4 |
| pyroglutamyl-peptidase i | AFIC_002127 | O58321 | Positive | 2192704 - 2193381 | 24624.7 |
| tigr03808 family tat-translocated repetitive protein | AFIC_002128 | Not Available | Positive | 2193433 - 2194785 | 46418.0 |
| tigr03809 family protein | AFIC_002129 | Not Available | Negative | 2194741 - 2195073 | 12340.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
