Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5330 domain-containing protein | AFIC_002110 | Q52968 | Positive | 2179579 - 2180106 | 18773.2 |
| sufe family protein | AFIC_002111 | Q52967 | Positive | 2180238 - 2180669 | 16280.3 |
| hypothetical protein | AFIC_002112 | Not Available | Negative | 2180683 - 2180832 | 5447.51 |
| duf6456 domain-containing protein | AFIC_002113 | Not Available | Negative | 2180908 - 2181510 | 21867.1 |
| hypothetical protein | AFIC_002114 | B0RH69 | Negative | 2181507 - 2181866 | 13010.6 |
| mucr family transcriptional regulator | AFIC_002115 | O33682 | Negative | 2182110 - 2182523 | 15060.3 |
| hypothetical protein | AFIC_002116 | Not Available | Negative | 2182658 - 2183497 | 30474.1 |
| glycosyltransferase family 39 protein | AFIC_002117 | Not Available | Positive | 2183802 - 2185454 | 60961.5 |
| hypothetical protein | AFIC_002118 | Not Available | Positive | 2185623 - 2185982 | 13452.0 |
| m20/m25/m40 family metallo-hydrolase | AFIC_002119 | Q3ZC84 | Negative | 2185993 - 2187399 | 50654.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
