Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002100 | Not Available | Negative | 2171142 - 2171426 | 10199.1 |
| terc family protein | AFIC_002101 | O31603 | Negative | 2171552 - 2172193 | 22997.0 |
| hypothetical protein | AFIC_002102 | Not Available | Negative | 2172458 - 2172817 | 13236.5 |
| hypothetical protein | AFIC_002103 | Not Available | Negative | 2173050 - 2173778 | 27377.9 |
| hypothetical protein | AFIC_002104 | Not Available | Negative | 2173833 - 2174039 | 7499.94 |
| duf2336 domain-containing protein | AFIC_002105 | Not Available | Positive | 2174299 - 2175228 | 33880.1 |
| substrate-binding domain-containing protein | AFIC_002106 | P0A5Y1 | Positive | 2175358 - 2176329 | 35211.2 |
| duf1491 family protein | AFIC_002107 | Not Available | Negative | 2176343 - 2176687 | 12813.2 |
| peptidoglycan-binding protein | AFIC_002108 | Not Available | Negative | 2176750 - 2177364 | 22090.0 |
| pas domain-containing sensor histidine kinase | AFIC_002109 | Q52969 | Negative | 2177375 - 2179177 | 64475.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
