Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002090 | Not Available | Negative | 2162313 - 2162513 | 7495.93 |
| hypothetical protein | AFIC_002091 | Not Available | Negative | 2162510 - 2163757 | 46563.1 |
| hypothetical protein | AFIC_002092 | Not Available | Negative | 2163925 - 2164131 | 7494.28 |
| mfs transporter | AFIC_002093 | A0A6J4B6H5 | Negative | 2164277 - 2165845 | 55034.8 |
| ycgn family cysteine cluster protein | AFIC_002094 | B6JFZ6 | Negative | 2166001 - 2166510 | 19221.7 |
| pbp1a family penicillin-binding protein | AFIC_002095 | O66874 | Positive | 2166887 - 2169154 | 82489.4 |
| duf1214 domain-containing protein | AFIC_002096 | Not Available | Positive | 2169189 - 2169767 | 20438.8 |
| duf1254 domain-containing protein | AFIC_002097 | Not Available | Positive | 2169764 - 2170333 | 20011.4 |
| hypothetical protein | AFIC_002098 | Not Available | Negative | 2170339 - 2170572 | 8860.06 |
| duf3551 domain-containing protein | AFIC_002099 | Not Available | Positive | 2170761 - 2171054 | 10510.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
