Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome biogenesis protein ccmi | AFIC_002057 | P45399 | Negative | 2137728 - 2138831 | 39527.4 |
| hypothetical protein | AFIC_002058 | Not Available | Negative | 2138948 - 2140330 | 50851.1 |
| sensor histidine kinase | AFIC_002059 | Q9I0I2 | Negative | 2140487 - 2141872 | 50323.7 |
| response regulator transcription factor | AFIC_002060 | Q9I4F9 | Negative | 2141862 - 2142539 | 25311.2 |
| pilz domain-containing protein | AFIC_002061 | Not Available | Negative | 2142703 - 2143014 | 11566.0 |
| hypothetical protein | AFIC_002062 | Not Available | Negative | 2143190 - 2143441 | 8326.87 |
| hypothetical protein | AFIC_002063 | Not Available | Negative | 2143443 - 2143835 | 13128.9 |
| hypothetical protein | AFIC_002064 | Not Available | Negative | 2143847 - 2144092 | 8672.42 |
| hypothetical protein | AFIC_002088 | Not Available | Negative | 2161705 - 2161989 | 10597.6 |
| hypothetical protein | AFIC_002089 | Not Available | Positive | 2162030 - 2162284 | 8835.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
