Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-forming succinate--coa ligase subunit beta | AFIC_002047 | B4EBY6 | Negative | 2123081 - 2124253 | 41023.4 |
| cytochrome ubiquinol oxidase subunit i | AFIC_002048 | P37894 | Positive | 2125338 - 2127023 | 62314.5 |
| bifunctional | AFIC_002049 | Q139J0 | Negative | 2127055 - 2130021 | 109322.0 |
| atp-binding protein | AFIC_002050 | I1WSZ3 | Negative | 2130018 - 2131427 | 51110.5 |
| response regulator transcription factor | AFIC_002051 | P0AD00 | Negative | 2131411 - 2132091 | 25493.6 |
| do family serine endopeptidase | AFIC_002052 | Q8YG32 | Negative | 2132268 - 2133845 | 54213.3 |
| pyridoxamine 5'-phosphate oxidase family protein | AFIC_002053 | Not Available | Negative | 2134008 - 2134643 | 22863.1 |
| cytochrome c-type biogenesis protein ccmh | AFIC_002054 | P45405 | Negative | 2134688 - 2135179 | 18294.3 |
| heme lyase ccmf/nrfe family subunit | AFIC_002055 | P45403 | Negative | 2135184 - 2137172 | 71688.8 |
| cytochrome c maturation protein ccme | AFIC_002056 | A4YRM0 | Negative | 2137169 - 2137669 | 17587.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
