Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | AFIC_002037 | O05494 | Positive | 2112796 - 2113521 | 26920.5 |
| fumarylacetoacetate hydrolase family protein | AFIC_002038 | O28058 | Negative | 2113717 - 2114490 | 27764.2 |
| pyruvate kinase | AFIC_002039 | P70789 | Negative | 2114531 - 2115940 | 50005.9 |
| 2-dehydropantoate 2-reductase | AFIC_002040 | Q987N5 | Negative | 2116099 - 2117118 | 36961.7 |
| 2-hydroxy-3-oxopropionate reductase | AFIC_002041 | P77161 | Negative | 2117183 - 2118175 | 34551.0 |
| hydroxypyruvate isomerase | AFIC_002042 | P30147 | Negative | 2118117 - 2118887 | 28492.3 |
| glyoxylate carboligase | AFIC_002043 | P0AEP8 | Negative | 2118941 - 2120734 | 65340.9 |
| helix-turn-helix domain-containing protein | AFIC_002044 | A1B8Z4 | Positive | 2120949 - 2121776 | 30319.6 |
| gfa family protein | AFIC_002045 | Q9CXS4 | Positive | 2121835 - 2122188 | 12608.1 |
| succinate--coa ligase subunit alpha | AFIC_002046 | Q9AKE1 | Negative | 2122198 - 2123079 | 30543.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
