Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AFIC_002027 | P21629 | Negative | 2098990 - 2099724 | 26170.0 |
| branched-chain amino acid abc transporter permease | AFIC_002028 | P21628 | Negative | 2099721 - 2100668 | 33397.8 |
| branched-chain amino acid abc transporter permease | AFIC_002029 | P0A2J2 | Negative | 2100665 - 2101528 | 30261.4 |
| amino acid abc transporter substrate-binding protein | AFIC_002030 | Q2YJA9 | Negative | 2101575 - 2102792 | 43594.8 |
| formyl-coa transferase | AFIC_002031 | B6JE29 | Negative | 2103018 - 2104292 | 46213.5 |
| oxalyl-coa decarboxylase | AFIC_002032 | P40149 | Negative | 2104369 - 2106108 | 61134.2 |
| oxalate/formate mfs antiporter | AFIC_002033 | Q51330 | Positive | 2106767 - 2108071 | 46559.9 |
| acetate--coa ligase family protein | AFIC_002034 | E7FI45 | Positive | 2108396 - 2110528 | 75065.1 |
| adp-forming succinate--coa ligase subunit beta | AFIC_002035 | B6JE33 | Positive | 2110541 - 2111737 | 42327.4 |
| succinate--coa ligase subunit alpha | AFIC_002036 | Q4ULQ8 | Positive | 2111742 - 2112650 | 30904.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
