Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mgtc/sapb family protein | AFIC_002017 | P0AFV3 | Positive | 2091177 - 2091893 | 25342.0 |
| hamp domain-containing histidine kinase | AFIC_002018 | Q52969 | Positive | 2092063 - 2093640 | 56897.2 |
| duf1289 domain-containing protein | AFIC_002019 | Not Available | Positive | 2093699 - 2093914 | 7676.45 |
| tigr02281 family clan aa aspartic protease | AFIC_002020 | P29938 | Positive | 2093958 - 2094470 | 18381.5 |
| trna dihydrouridine(20/20a) synthase dusa | AFIC_002021 | Q87L85 | Negative | 2094471 - 2095469 | 36147.7 |
| hypothetical protein | AFIC_002022 | Not Available | Negative | 2095579 - 2096043 | 15690.3 |
| yban family protein | AFIC_002023 | P0AAR6 | Positive | 2096261 - 2096617 | 12700.3 |
| marr family winged helix-turn-helix transcriptional regulator | AFIC_002024 | Not Available | Positive | 2096821 - 2097513 | 24827.5 |
| carboxymuconolactone decarboxylase family protein | AFIC_002025 | Not Available | Positive | 2097638 - 2098183 | 18796.5 |
| abc transporter atp-binding protein | AFIC_002026 | P21630 | Negative | 2098256 - 2098993 | 26201.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
