Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had-ia family hydrolase | AFIC_002007 | Q98ML8 | Positive | 2080992 - 2081675 | 24182.1 |
| pega domain-containing protein | AFIC_002008 | Not Available | Positive | 2081843 - 2082286 | 14907.0 |
| gtp 3',8-cyclase moaa | AFIC_002009 | Q89NT2 | Positive | 2082403 - 2083434 | 37891.9 |
| trap transporter small permease subunit | AFIC_002010 | Not Available | Positive | 2083590 - 2084126 | 19945.8 |
| trap transporter large permease subunit | AFIC_002011 | Q9HU16 | Positive | 2084142 - 2085554 | 51015.7 |
| trap transporter substrate-binding protein | AFIC_002012 | Q3J1R2 | Negative | 2085640 - 2086728 | 39997.0 |
| trap transporter substrate-binding protein | AFIC_002013 | Q3J1R2 | Negative | 2086901 - 2087989 | 39700.3 |
| mrp/nbp35 family atp-binding protein | AFIC_002014 | O49472 | Negative | 2088131 - 2089234 | 38751.4 |
| duf47 domain-containing protein | AFIC_002015 | O30498 | Positive | 2089495 - 2090136 | 24286.2 |
| inorganic phosphate transporter | AFIC_002016 | O30499 | Positive | 2090149 - 2091153 | 35157.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
