Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | AFIC_001997 | B6JHT8 | Negative | 2069857 - 2071251 | 51421.8 |
| hypothetical protein | AFIC_001998 | Not Available | Positive | 2071531 - 2071830 | 10436.2 |
| duf2865 domain-containing protein | AFIC_001999 | Not Available | Positive | 2071981 - 2073042 | 37665.7 |
| nad+ synthase | AFIC_002000 | Q03638 | Negative | 2073055 - 2074809 | 63274.7 |
| diacylglycerol kinase | AFIC_002001 | Q9HY23 | Negative | 2074871 - 2075224 | 12750.0 |
| 3-deoxy-7-phosphoheptulonate synthase class ii | AFIC_002002 | P29976 | Negative | 2075226 - 2076614 | 51033.8 |
| ynce family protein | AFIC_002003 | Not Available | Negative | 2076907 - 2078064 | 40156.5 |
| glutathione-disulfide reductase | AFIC_002004 | P48639 | Negative | 2078180 - 2079565 | 49546.5 |
| duf2059 domain-containing protein | AFIC_002005 | Not Available | Negative | 2079629 - 2080132 | 18396.2 |
| ribose-5-phosphate isomerase rpia | AFIC_002006 | B6JE08 | Negative | 2080144 - 2080854 | 24652.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
