Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor protein motb | AFIC_001987 | P55892 | Negative | 2060230 - 2061057 | 30452.5 |
| mota/tolq/exbb proton channel family protein | AFIC_001988 | O06873 | Negative | 2061088 - 2061861 | 27831.4 |
| hypothetical protein | AFIC_001989 | Not Available | Positive | 2062078 - 2062290 | 6787.7 |
| phosphatidylcholine/phosphatidylserine synthase | AFIC_001990 | Q9ZBM2 | Negative | 2062307 - 2063191 | 31886.4 |
| phosphatidylserine decarboxylase | AFIC_001991 | B6JHT1 | Negative | 2063283 - 2063996 | 25754.6 |
| abc transporter atp-binding protein/permease | AFIC_001992 | Q2G506 | Negative | 2064139 - 2066076 | 72429.7 |
| tigr00730 family rossman fold protein | AFIC_001993 | P48636 | Positive | 2066274 - 2066885 | 21677.4 |
| hypothetical protein | AFIC_001994 | Not Available | Positive | 2066882 - 2067667 | 28061.8 |
| citramalate synthase | AFIC_001995 | O66682 | Negative | 2067634 - 2069229 | 57321.9 |
| gnat family n-acetyltransferase | AFIC_001996 | Q47158 | Negative | 2069226 - 2069747 | 18197.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
