Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-hydroxyacyl-acp dehydratase | AFIC_001977 | Q03RV0 | Positive | 2048372 - 2048839 | 17276.1 |
| beta-ketoacyl-acp synthase | AFIC_001978 | P55338 | Positive | 2048836 - 2050035 | 41851.7 |
| beta-ketoacyl-acp synthase | AFIC_001979 | P16538 | Positive | 2050051 - 2051331 | 44379.8 |
| zinc-binding dehydrogenase | AFIC_001980 | Q06004 | Positive | 2051444 - 2052466 | 36522.7 |
| lipid a biosynthesis lauroyl acyltransferase | AFIC_001981 | P59198 | Positive | 2052467 - 2053399 | 34645.9 |
| polyamine abc transporter substrate-binding protein | AFIC_001982 | Q9I6J0 | Negative | 2053403 - 2054494 | 40061.0 |
| aminotransferase | AFIC_001983 | P9WPZ4 | Negative | 2054498 - 2055649 | 42468.3 |
| hypothetical protein | AFIC_001984 | P73801 | Negative | 2055695 - 2056027 | 11468.8 |
| potassium transporter kup | AFIC_001985 | A4YWY8 | Negative | 2056114 - 2058036 | 68702.8 |
| potassium transporter kup | AFIC_001986 | A5EHG1 | Negative | 2058167 - 2060068 | 68851.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
