Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_001967 | Not Available | Negative | 2039439 - 2039648 | 7540.61 |
| pepsy domain-containing protein | AFIC_001968 | P42514 | Negative | 2039645 - 2040799 | 42838.8 |
| tonb-dependent siderophore receptor | AFIC_001969 | Q47162 | Negative | 2040811 - 2043204 | 87149.4 |
| hypothetical protein | AFIC_001970 | Not Available | Negative | 2043610 - 2043804 | 6704.23 |
| Trna-gln | Not Available | Not Available | Positive | 2044096 - 2044169 | Not Available |
| duf87 domain-containing protein | AFIC_001972 | Q60270 | Positive | 2044534 - 2046312 | 65259.5 |
| mgtc/sapb family protein | AFIC_001973 | Q55026 | Positive | 2046319 - 2046777 | 15715.7 |
| chromosome partitioning protein parb | AFIC_001974 | Not Available | Negative | 2046784 - 2047407 | 24030.1 |
| hypothetical protein | AFIC_001975 | Not Available | Positive | 2047621 - 2047905 | 10313.5 |
| acyl carrier protein | AFIC_001976 | P63450 | Positive | 2048079 - 2048360 | 10219.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
