Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | AFIC_001947 | Q7AKG9 | Positive | 2015095 - 2015622 | 20056.3 |
| anti-sigma factor | AFIC_001948 | Not Available | Positive | 2015622 - 2016395 | 28166.8 |
| glutamine-hydrolyzing gmp synthase | AFIC_001949 | B6JHM4 | Negative | 2016416 - 2018011 | 57787.7 |
| rsmb/nop family class i sam-dependent rna methyltransferase | AFIC_001950 | P72943 | Negative | 2018084 - 2019388 | 46085.1 |
| hypothetical protein | AFIC_001951 | Not Available | Negative | 2019405 - 2019767 | 13292.9 |
| imp dehydrogenase | AFIC_001952 | Q9KH33 | Negative | 2019847 - 2021343 | 52688.4 |
| mfs transporter | AFIC_001953 | P31474 | Positive | 2021687 - 2023150 | 51627.4 |
| rlme family rna methyltransferase | AFIC_001954 | B6JHM9 | Negative | 2023147 - 2023827 | 24311.2 |
| ppx/gppa family phosphatase | AFIC_001955 | Q6LLL4 | Negative | 2023858 - 2024910 | 37573.3 |
| yaii/yqxd family protein | AFIC_001956 | Q3SQN5 | Positive | 2025103 - 2025561 | 16346.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
