Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AFIC_001937 | P21629 | Negative | 2007617 - 2008369 | 27580.2 |
| hypothetical protein | AFIC_001938 | Not Available | Positive | 2008627 - 2009259 | 24215.4 |
| arsc family reductase | AFIC_001939 | P24178 | Negative | 2009284 - 2009685 | 14806.0 |
| methylated-dna--[protein]-cysteine s-methyltransferase | AFIC_001940 | Q9ZET8 | Negative | 2009734 - 2010291 | 19636.6 |
| pyridoxamine 5'-phosphate oxidase family protein | AFIC_001941 | Not Available | Negative | 2010313 - 2010945 | 24030.6 |
| lysr family transcriptional regulator | AFIC_001942 | P52689 | Positive | 2011043 - 2011966 | 33079.4 |
| rida family protein | AFIC_001943 | O58584 | Positive | 2011963 - 2012358 | 14623.6 |
| lin0512 family protein | AFIC_001944 | Not Available | Negative | 2012380 - 2012721 | 11935.5 |
| duf305 domain-containing protein | AFIC_001945 | Not Available | Positive | 2013057 - 2013566 | 18067.8 |
| ynce family protein | AFIC_001946 | Not Available | Positive | 2013577 - 2015031 | 51257.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
