Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase der | AFIC_001927 | Q6N586 | Negative | 1998532 - 1999908 | 50244.0 |
| hypothetical protein | AFIC_001928 | Not Available | Negative | 1999971 - 2000486 | 17656.1 |
| tetratricopeptide repeat protein | AFIC_001929 | Not Available | Negative | 2000491 - 2001135 | 23301.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | AFIC_001930 | B6JGY0 | Negative | 2001309 - 2002142 | 29570.0 |
| nnru family protein | AFIC_001931 | Not Available | Negative | 2002142 - 2002726 | 20478.9 |
| peptide chain release factor 3 | AFIC_001932 | A5F904 | Negative | 2002847 - 2004481 | 60029.7 |
| quaternary ammonium compound efflux smr transporter suge | AFIC_001933 | Q8D1E4 | Positive | 2004662 - 2004976 | 10707.8 |
| branched-chain amino acid abc transporter permease | AFIC_001934 | P22729 | Negative | 2005072 - 2005965 | 32239.4 |
| branched-chain amino acid abc transporter permease | AFIC_001935 | P0A2J2 | Negative | 2006042 - 2006905 | 31014.4 |
| abc transporter atp-binding protein | AFIC_001936 | P21630 | Negative | 2006908 - 2007624 | 26253.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
