Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | AFIC_001907 | Q89MV4 | Negative | 1977938 - 1978588 | 24651.3 |
| yicc family protein | AFIC_001908 | P44726 | Negative | 1978594 - 1979481 | 31819.8 |
| endolytic transglycosylase mltg | AFIC_001909 | P44720 | Negative | 1979613 - 1980980 | 48796.3 |
| beta-ketoacyl-acp synthase ii | AFIC_001910 | P56902 | Negative | 1981078 - 1982343 | 44156.9 |
| acyl carrier protein | AFIC_001911 | B6JGN3 | Negative | 1982428 - 1982667 | 8587.09 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | AFIC_001912 | P72332 | Negative | 1983062 - 1983799 | 25742.2 |
| acp s-malonyltransferase | AFIC_001913 | P0AAJ0 | Negative | 1983815 - 1984771 | 32259.0 |
| 30s ribosomal protein s6 | AFIC_001914 | B6JGN7 | Positive | 1985152 - 1985598 | 16742.6 |
| 30s ribosomal protein s18 | AFIC_001915 | B6JGW4 | Positive | 1985604 - 1985843 | 9076.38 |
| yybs family protein | AFIC_001916 | Not Available | Positive | 1985988 - 1986953 | 33167.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
