Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit chi | AFIC_001897 | Q9ZC94 | Negative | 1966277 - 1966750 | 17686.7 |
| leucyl aminopeptidase | AFIC_001898 | B6JGL8 | Negative | 1966778 - 1968280 | 52612.7 |
| lps export abc transporter permease lptg | AFIC_001899 | P0ADC7 | Positive | 1968764 - 1969846 | 39063.0 |
| lps-assembly protein lptd | AFIC_001900 | Q6D0E3 | Positive | 1969897 - 1972350 | 90799.9 |
| sura n-terminal domain-containing protein | AFIC_001901 | Q88A44 | Positive | 1972358 - 1973359 | 36701.4 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | AFIC_001902 | Q3V7R9 | Positive | 1973365 - 1974375 | 35138.5 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | AFIC_001903 | B6JGM4 | Positive | 1974372 - 1975223 | 31099.0 |
| alcohol dehydrogenase catalytic domain-containing protein | AFIC_001904 | P39462 | Positive | 1975274 - 1976293 | 35942.9 |
| hypothetical protein | AFIC_001905 | Not Available | Negative | 1976299 - 1976622 | 11122.5 |
| hypothetical protein | AFIC_001906 | Not Available | Negative | 1977428 - 1977658 | 8746.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
