Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | AFIC_001887 | Q215Q6 | Positive | 1957186 - 1958259 | 37042.9 |
| phosphoribosylglycinamide formyltransferase | AFIC_001888 | P22102 | Positive | 1958256 - 1958909 | 23406.4 |
| autotransporter outer membrane beta-barrel domain-containing protein | AFIC_001889 | Not Available | Positive | 1959043 - 1960107 | 36754.0 |
| yjbe family putative metal transport protein | AFIC_001890 | O31603 | Negative | 1960097 - 1960852 | 26351.3 |
| terc family protein | AFIC_001891 | O31603 | Negative | 1961179 - 1962036 | 30090.9 |
| nucleoside-diphosphate kinase | AFIC_001892 | A5EIC0 | Negative | 1962167 - 1962589 | 14980.0 |
| hypothetical protein | AFIC_001893 | Not Available | Positive | 1962874 - 1963188 | 10985.1 |
| hypothetical protein | AFIC_001894 | Not Available | Positive | 1963405 - 1963623 | 7994.57 |
| atp-binding cassette domain-containing protein | AFIC_001895 | P63390 | Positive | 1963680 - 1965539 | 67800.0 |
| hypothetical protein | AFIC_001896 | Not Available | Negative | 1965546 - 1966085 | 18472.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
