Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_001877 | Not Available | Positive | 1943778 - 1944323 | 19674.3 |
| doxx family protein | AFIC_001878 | Not Available | Negative | 1944328 - 1944783 | 15972.7 |
| nadp-dependent malic enzyme | AFIC_001879 | O30807 | Negative | 1944936 - 1947236 | 82560.1 |
| aspartate--trna ligase | AFIC_001880 | B6JGJ7 | Negative | 1947284 - 1949056 | 66534.5 |
| ribonuclease d | AFIC_001881 | Q1QLI8 | Positive | 1949447 - 1950595 | 42801.4 |
| hypothetical protein | AFIC_001882 | Not Available | Negative | 1950603 - 1951721 | 38793.6 |
| exopolyphosphatase | AFIC_001883 | P32608 | Negative | 1951868 - 1953484 | 59104.5 |
| rna degradosome polyphosphate kinase | AFIC_001884 | A5EID1 | Negative | 1953411 - 1955612 | 82579.6 |
| dnaa/hda family protein | AFIC_001885 | Q87TQ7 | Negative | 1955785 - 1956474 | 24768.8 |
| cdp-alcohol phosphatidyltransferase family protein | AFIC_001886 | O01916 | Negative | 1956483 - 1957025 | 19415.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
