Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | AFIC_001867 | Q8G2M7 | Negative | 1932400 - 1933605 | 43405.9 |
| methyl-accepting chemotaxis protein | AFIC_001868 | Q2W4T8 | Negative | 1933848 - 1935053 | 40431.8 |
| efflux rnd transporter periplasmic adaptor subunit | AFIC_001869 | A6TBH3 | Negative | 1935247 - 1936425 | 41506.6 |
| efflux rnd transporter permease subunit | AFIC_001870 | P25197 | Negative | 1936415 - 1939606 | 114442.0 |
| multidrug efflux smr transporter | AFIC_001871 | Q9HUH5 | Positive | 1939835 - 1940164 | 11718.9 |
| hypothetical protein | AFIC_001872 | Not Available | Positive | 1940176 - 1940325 | 5300.74 |
| hypothetical protein | AFIC_001873 | Not Available | Positive | 1940322 - 1940579 | 8833.74 |
| crea family protein | AFIC_001874 | P0AE93 | Negative | 1940638 - 1941168 | 19567.6 |
| l,d-transpeptidase | AFIC_001875 | Not Available | Positive | 1941417 - 1942730 | 47124.9 |
| polysaccharide deacetylase family protein | AFIC_001876 | Q8DP63 | Positive | 1942832 - 1943767 | 33655.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
