Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chase3 domain-containing protein | AFIC_001847 | E5KK10 | Positive | 1906803 - 1908338 | 57014.3 |
| response regulator | AFIC_001848 | Q55169 | Positive | 1908331 - 1908771 | 16142.5 |
| response regulator | AFIC_001849 | P9WGL4 | Positive | 1908768 - 1909850 | 38924.7 |
| leucyl/phenylalanyl-trna--protein transferase | AFIC_001850 | B6JH85 | Positive | 1909882 - 1910568 | 24842.6 |
| duf2155 domain-containing protein | AFIC_001851 | Q9ZDG9 | Negative | 1910589 - 1911506 | 32638.9 |
| nadh:ubiquinone oxidoreductase subunit ndufa12 | AFIC_001852 | Q54MV7 | Negative | 1911622 - 1912032 | 15804.5 |
| ba14k family protein | AFIC_001853 | Not Available | Positive | 1912287 - 1912706 | 14176.8 |
| dmt family transporter | AFIC_001854 | O32256 | Negative | 1912765 - 1913700 | 32523.9 |
| vitamin b12-dependent ribonucleotide reductase | AFIC_001855 | Q89MB9 | Positive | 1914364 - 1918104 | 136783.0 |
| duf5677 domain-containing protein | AFIC_001856 | Not Available | Positive | 1918186 - 1919109 | 35152.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
