Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | AFIC_001837 | Q2W3F8 | Negative | 1891575 - 1892642 | 39349.1 |
| penicillin-binding protein 1a | AFIC_001838 | Q4UK08 | Negative | 1892800 - 1895289 | 90790.1 |
| n-acetylmuramoyl-l-alanine amidase | AFIC_001839 | P63884 | Negative | 1895470 - 1896771 | 46613.6 |
| cytochrome ubiquinol oxidase subunit i | AFIC_001840 | P44443 | Positive | 1897467 - 1900016 | 95547.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | AFIC_001841 | P96847 | Negative | 1900546 - 1901730 | 42767.3 |
| m48 family metalloprotease | AFIC_001842 | Q8ZCC3 | Positive | 1901892 - 1903301 | 50515.8 |
| dsba family protein | AFIC_001843 | Q9S2C8 | Positive | 1903331 - 1904095 | 27424.1 |
| type ii 3-dehydroquinate dehydratase | AFIC_001844 | B6JHG1 | Positive | 1904353 - 1904808 | 16333.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | AFIC_001845 | P0ABE0 | Positive | 1904845 - 1905336 | 16941.6 |
| acetyl-coa carboxylase biotin carboxylase subunit | AFIC_001846 | P24182 | Positive | 1905373 - 1906728 | 48845.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
