Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly atpase sufc | AFIC_001827 | P48255 | Negative | 1878150 - 1878908 | 27559.5 |
| fe-s cluster assembly protein sufb | AFIC_001828 | Q55790 | Negative | 1878905 - 1880404 | 55995.2 |
| cysteine desulfurase | AFIC_001829 | Q01179 | Negative | 1880498 - 1881679 | 40788.3 |
| alpha/beta hydrolase | AFIC_001830 | Q9ZD73 | Positive | 1881884 - 1882531 | 23916.8 |
| anhydro-n-acetylmuramic acid kinase | AFIC_001831 | Q3SS13 | Negative | 1882535 - 1883632 | 38608.7 |
| tyrosine--trna ligase | AFIC_001832 | Q98NS5 | Positive | 1883718 - 1884971 | 46085.6 |
| duf3971 domain-containing protein | AFIC_001833 | Not Available | Negative | 1884986 - 1888561 | 126345.0 |
| thioredoxin-dependent thiol peroxidase | AFIC_001834 | Q9ZMU4 | Positive | 1888733 - 1889458 | 26011.4 |
| m23 family metallopeptidase | AFIC_001835 | P44693 | Positive | 1890549 - 1890875 | 11393.3 |
| dihydrofolate reductase family protein | AFIC_001836 | P37508 | Negative | 1890893 - 1891660 | 27919.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
