Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-gamma-glutamyl-phosphate reductase | AFIC_001817 | B6JHG4 | Negative | 1866498 - 1867556 | 38630.5 |
| deda family protein | AFIC_001818 | P30149 | Negative | 1867791 - 1868327 | 19713.2 |
| dna topoisomerase iv subunit b | AFIC_001819 | P94281 | Positive | 1868507 - 1870576 | 75253.9 |
| fad-dependent oxidoreductase | AFIC_001820 | Q3S8R0 | Negative | 1870573 - 1871817 | 45595.3 |
| dead/deah box helicase | AFIC_001821 | P25888 | Positive | 1872108 - 1873526 | 51270.1 |
| diguanylate cyclase | AFIC_001822 | Q9KKZ4 | Positive | 1873688 - 1874701 | 37410.8 |
| iron-sulfur cluster assembly accessory protein | AFIC_001823 | Q9ZD62 | Negative | 1874714 - 1875121 | 14474.4 |
| suf system fe-s cluster assembly protein | AFIC_001824 | P70949 | Negative | 1875200 - 1875586 | 13843.3 |
| cysteine desulfurase | AFIC_001825 | Q9K7A0 | Negative | 1875583 - 1876848 | 45723.8 |
| fe-s cluster assembly protein sufd | AFIC_001826 | Q55792 | Negative | 1876827 - 1878149 | 46614.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
