Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | AFIC_001807 | B6JHH8 | Positive | 1855405 - 1855971 | 20715.6 |
| lytic murein transglycosylase | AFIC_001808 | P41052 | Positive | 1856049 - 1857275 | 45168.6 |
| single-stranded-dna-specific exonuclease recj | AFIC_001809 | O32044 | Negative | 1857281 - 1859122 | 65264.8 |
| haloacid dehalogenase type ii | AFIC_001810 | Q60099 | Negative | 1859184 - 1859894 | 26267.5 |
| class ii fructose-bisphosphatase | AFIC_001811 | Q03224 | Negative | 1859911 - 1860906 | 35267.8 |
| homoserine dehydrogenase | AFIC_001812 | P29365 | Negative | 1860957 - 1862279 | 46151.1 |
| ll-diaminopimelate aminotransferase | AFIC_001813 | O87320 | Negative | 1862304 - 1863521 | 44552.8 |
| hypothetical protein | AFIC_001814 | Not Available | Negative | 1863590 - 1863940 | 12292.9 |
| class i poly(r)-hydroxyalkanoic acid synthase | AFIC_001815 | O66392 | Positive | 1864147 - 1865946 | 67012.0 |
| mapeg family protein | AFIC_001816 | Not Available | Positive | 1866062 - 1866460 | 14791.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
