Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 1849304 - 1849380 | Not Available |
| duf192 domain-containing protein | AFIC_001798 | Not Available | Negative | 1849437 - 1849919 | 17355.3 |
| cspa family cold shock protein | AFIC_001799 | Q9S170 | Negative | 1850054 - 1850716 | 24050.6 |
| hypothetical protein | AFIC_001800 | Not Available | Positive | 1851038 - 1851298 | 9647.98 |
| voc family protein | AFIC_001801 | P0A0T2 | Positive | 1851553 - 1852002 | 17157.5 |
| hypothetical protein | AFIC_001802 | Not Available | Negative | 1852196 - 1852537 | 11744.4 |
| Trna-glu | Not Available | Not Available | Positive | 1852606 - 1852680 | Not Available |
| hypothetical protein | AFIC_001804 | Not Available | Negative | 1852870 - 1853145 | 9249.07 |
| lysine-2,3-aminomutase-like protein | AFIC_001805 | Q9XBQ8 | Negative | 1853180 - 1854241 | 39104.2 |
| ef-p lysine aminoacylase epma | AFIC_001806 | Q9KNS6 | Negative | 1854238 - 1855263 | 37909.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
