Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| etc complex i subunit | AFIC_001787 | Q02375 | Negative | 1829439 - 1829744 | 11760.9 |
| opgc domain-containing protein | AFIC_001788 | Not Available | Positive | 1829922 - 1831067 | 43145.6 |
| hypothetical protein | AFIC_001789 | Not Available | Positive | 1831115 - 1831576 | 16332.8 |
| tolc family outer membrane protein | AFIC_001790 | Q8G0Y6 | Positive | 1831906 - 1833183 | 46842.4 |
| hypothetical protein | AFIC_001791 | Not Available | Negative | 1833218 - 1833520 | 10405.2 |
| type i secretion system permease/atpase | AFIC_001792 | P26760 | Positive | 1833775 - 1836015 | 80931.9 |
| hlyd family type i secretion periplasmic adaptor subunit | AFIC_001793 | Q7ANN5 | Positive | 1836002 - 1837255 | 46290.8 |
| transglutaminase-like cysteine peptidase | AFIC_001794 | Not Available | Positive | 1837491 - 1838531 | 36478.9 |
| duf5801 domain-containing protein | AFIC_001795 | Not Available | Negative | 1838623 - 1848465 | 334125.0 |
| hypothetical protein | AFIC_001796 | Not Available | Positive | 1848703 - 1849092 | 13836.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
