Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase n-terminal domain-containing protein | AFIC_001777 | Q3KLU2 | Negative | 1820875 - 1821213 | 12820.0 |
| glycosyltransferase family 2 protein | AFIC_001778 | Q1MJ95 | Negative | 1821213 - 1821968 | 27788.3 |
| phosphatase pap2 family protein | AFIC_001779 | Q1MA49 | Negative | 1822065 - 1822847 | 28179.2 |
| glycosyltransferase family 39 protein | AFIC_001780 | A4SQX1 | Negative | 1822872 - 1824614 | 63318.9 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | AFIC_001781 | Not Available | Positive | 1824872 - 1825681 | 31642.8 |
| Trna-arg | Not Available | Not Available | Positive | 1825814 - 1825890 | Not Available |
| hypothetical protein | AFIC_001783 | Not Available | Negative | 1825977 - 1826336 | 13831.3 |
| trap transporter substrate-binding protein dctp | AFIC_001784 | Q21XD7 | Positive | 1826448 - 1827461 | 36152.6 |
| trap transporter small permease | AFIC_001785 | P37674 | Positive | 1827461 - 1828009 | 20007.6 |
| trap transporter large permease | AFIC_001786 | Q9HU16 | Positive | 1828006 - 1829364 | 48276.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
