Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | AFIC_001767 | C9XVZ5 | Negative | 1808443 - 1809705 | 44330.7 |
| efflux transporter outer membrane subunit | AFIC_001768 | O31101 | Negative | 1809695 - 1811191 | 53525.6 |
| cyclopropane-fatty-acyl-phospholipid synthase family protein | AFIC_001769 | O53732 | Positive | 1811646 - 1812872 | 46812.9 |
| cysteine synthase a | AFIC_001770 | Q7RYW6 | Positive | 1812977 - 1814014 | 36719.1 |
| outer membrane beta-barrel protein | AFIC_001771 | P55561 | Negative | 1814142 - 1814684 | 19534.7 |
| amino acid abc transporter atp-binding protein | AFIC_001772 | Q52815 | Negative | 1815130 - 1815882 | 28210.5 |
| amino acid abc transporter permease | AFIC_001773 | Q52814 | Negative | 1815884 - 1817248 | 49674.7 |
| abc transporter permease subunit | AFIC_001774 | P45767 | Negative | 1817245 - 1818450 | 43153.6 |
| amino acid abc transporter substrate-binding protein | AFIC_001775 | Q52812 | Negative | 1818465 - 1819484 | 37110.4 |
| cystathionine beta-lyase | AFIC_001776 | Q52811 | Positive | 1819663 - 1820871 | 42726.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
