Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | AFIC_001747 | Q04849 | Negative | 1782895 - 1784265 | 50213.6 |
| pas domain-containing sensor histidine kinase | AFIC_001748 | Q04850 | Negative | 1784255 - 1786534 | 83425.8 |
| nitrogen regulation protein nr(i) | AFIC_001749 | P10576 | Negative | 1786686 - 1788131 | 53125.4 |
| nitrogen regulation protein nr(ii) | AFIC_001750 | P10578 | Negative | 1788141 - 1789298 | 41669.1 |
| trna dihydrouridine synthase dusb | AFIC_001751 | P41504 | Negative | 1789295 - 1790329 | 36282.8 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | AFIC_001752 | Q07MZ2 | Positive | 1790551 - 1791750 | 41759.7 |
| cytochrome ubiquinol oxidase subunit i | AFIC_001753 | P51967 | Positive | 1791752 - 1792222 | 16294.7 |
| type ii toxin-antitoxin system rata family toxin | AFIC_001754 | Q8FEY4 | Negative | 1792257 - 1792724 | 17912.6 |
| lipoyl synthase | AFIC_001755 | B6JDY1 | Negative | 1792724 - 1793692 | 35861.0 |
| dna-3-methyladenine glycosylase | AFIC_001756 | Q89LR7 | Positive | 1793809 - 1794450 | 23236.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
