Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta' | AFIC_001737 | P52024 | Positive | 1773610 - 1774653 | 37271.5 |
| methionine--trna ligase | AFIC_001738 | P59078 | Positive | 1774700 - 1776271 | 58390.2 |
| tatd family hydrolase | AFIC_001739 | P37545 | Positive | 1776271 - 1777065 | 29171.4 |
| mbl fold metallo-hydrolase | AFIC_001740 | Q7MUY1 | Positive | 1777062 - 1777862 | 29479.8 |
| cupredoxin family protein | AFIC_001741 | P21697 | Negative | 1778010 - 1778591 | 21363.7 |
| 7-cyano-7-deazaguanine synthase quec | AFIC_001742 | Q1QM87 | Negative | 1778528 - 1779244 | 26291.3 |
| nucleoside triphosphate pyrophosphohydrolase | AFIC_001743 | P0AEY4 | Positive | 1779371 - 1780210 | 30261.9 |
| gtpase hflx | AFIC_001744 | A0L4B2 | Negative | 1780213 - 1781529 | 49164.1 |
| rna chaperone hfq | AFIC_001745 | B6JDZ0 | Negative | 1781614 - 1781862 | 9108.1 |
| d-amino-acid transaminase | AFIC_001746 | O07597 | Negative | 1782034 - 1782891 | 31021.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
